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accession-icon GSE53225
Expression data from miR-92 over-expressing R26MER/MER mouse embryonic fibroblast (MEFs)
  • organism-icon Mus musculus
  • sample-icon 6 Downloadable Samples
  • Technology Badge Icon

Description

miR-92 enhances c-Myc induced apoptosis. In the R26MER/MER mouse embryonic fibroblasts (MEFs), a switchable variant of Myc, MycERT2, was knocked into the genomic region downstream of the constitutive Rosa26 promoter, allowing acute activation of c-Myc by 4-OHT-induced nuclear translocation. This in vitro system nicely recapitulates c-Myc-induced apoptosis, as activated MycERT2 induces strong p53-dependent apoptosis in response to serum starvation. Enforced miR-92 expression in three independent R26MER/MER MEF lines significantly enhanced Myc-induced apoptosis.

Publication Title

A component of the mir-17-92 polycistronic oncomir promotes oncogene-dependent apoptosis.

Sample Metadata Fields

Specimen part

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accession-icon GSE30268
Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC).
  • organism-icon Mus musculus, Homo sapiens
  • sample-icon 1 Downloadable Sample
  • Technology Badge Icon

Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC).

Sample Metadata Fields

Specimen part, Cell line, Treatment

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accession-icon GSE30176
Retinoic acid (RA) induction time-course to profile gene expression during mES cell differentiation.
  • organism-icon Mus musculus
  • sample-icon 1 Downloadable Sample
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Description

Murine ES cell gene expression before RA induction are used to compare gene expression for time-points of 2, 4, 6hrs post-induction.

Publication Title

Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC).

Sample Metadata Fields

No sample metadata fields

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accession-icon GSE10784
Gene profile data from Df(16)A/+ and wild type littermates
  • organism-icon Mus musculus
  • sample-icon 40 Downloadable Samples
  • Technology Badge Icon

Description

This represents an unbiased evaluation of the transcriptional response in the prefrontal cortex and hippocampus areas in the Df(16)A/+ mice, a mouse model of human 22q11 microdeletion syndrome. These mice were generated by chromosomal engineering and carry a microdeltion of ~1.3Mb in the mouse locus syntenic to the human 22q11.1

Publication Title

Altered brain microRNA biogenesis contributes to phenotypic deficits in a 22q11-deletion mouse model.

Sample Metadata Fields

No sample metadata fields

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refine.bio is a repository of uniformly processed and normalized, ready-to-use transcriptome data from publicly available sources. refine.bio is a project of the Childhood Cancer Data Lab (CCDL)

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Cite refine.bio

Casey S. Greene, Dongbo Hu, Richard W. W. Jones, Stephanie Liu, David S. Mejia, Rob Patro, Stephen R. Piccolo, Ariel Rodriguez Romero, Hirak Sarkar, Candace L. Savonen, Jaclyn N. Taroni, William E. Vauclain, Deepashree Venkatesh Prasad, Kurt G. Wheeler. refine.bio: a resource of uniformly processed publicly available gene expression datasets.
URL: https://www.refine.bio

Note that the contributor list is in alphabetical order as we prepare a manuscript for submission.

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