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accession-icon GSE13196
Expression data from zebrafish pineal gland
  • organism-icon Danio rerio
  • sample-icon 3 Downloadable Samples
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Description

Microarray data allowed detection of genes that are highly expressed in the pineal gland.

Publication Title

A new cis-acting regulatory element driving gene expression in the zebrafish pineal gland.

Sample Metadata Fields

Sex

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accession-icon GSE25639
A mouse model of deregulation of the malt1 oncogene recapitulates the pathogenesis of human malt lymphoma
  • organism-icon Mus musculus, Homo sapiens
  • sample-icon 10 Downloadable Samples
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Description

This SuperSeries is composed of the SubSeries listed below.

Publication Title

Expression of MALT1 oncogene in hematopoietic stem/progenitor cells recapitulates the pathogenesis of human lymphoma in mice.

Sample Metadata Fields

Specimen part, Disease

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accession-icon GSE42008
Expression data from NcGFP ki/+, NcGFP ki/ki and wt (W4) ES cells
  • organism-icon Mus musculus
  • sample-icon 6 Downloadable Samples
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Description

We generated a gene replacement allele of the E-cadherin locus that express an N-cadherin-GFP fusion in ES cells. Expression profiles of homozygous and heterozygous knock-in ES cells were analyzed in comparison to wt ES cells.

Publication Title

Adhesion, but not a specific cadherin code, is indispensable for ES cell and induced pluripotency.

Sample Metadata Fields

No sample metadata fields

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refine.bio is a repository of uniformly processed and normalized, ready-to-use transcriptome data from publicly available sources. refine.bio is a project of the Childhood Cancer Data Lab (CCDL)

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Developed by the Childhood Cancer Data Lab

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Cite refine.bio

Casey S. Greene, Dongbo Hu, Richard W. W. Jones, Stephanie Liu, David S. Mejia, Rob Patro, Stephen R. Piccolo, Ariel Rodriguez Romero, Hirak Sarkar, Candace L. Savonen, Jaclyn N. Taroni, William E. Vauclain, Deepashree Venkatesh Prasad, Kurt G. Wheeler. refine.bio: a resource of uniformly processed publicly available gene expression datasets.
URL: https://www.refine.bio

Note that the contributor list is in alphabetical order as we prepare a manuscript for submission.

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